A0A0B7N3E3 protein (Parasitella parasitica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0B7N3E3

Uncharacterized protein. (253 aa)

Predicted Functional Partners:

A0A0B7MQW3

0.787

A0A0B7N9H8

0.787

A0A0B7NEI8

0.780

A0A0B7NKJ1

0.777

A0A0B7NTV9

0.776

A0A0B7MWW2

0.773

A0A0B7N349

0.773

A0A0B7N3P4

0.773

A0A0B7MQ97

0.738

A0A0B7NEM0

0.738

Your Current Organism:

Parasitella parasitica

NCBI taxonomy Id: 35722
Other names: P. parasitica, Parasitella simplex

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0B7MQ97	A0A0B7MQW3	WD_REPEATS_REGION domain-containing protein.	Ribosomal_S17_N domain-containing protein.	0.984
A0A0B7MQ97	A0A0B7MWW2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.982
A0A0B7MQ97	A0A0B7N349	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.976
A0A0B7MQ97	A0A0B7N3E3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.738
A0A0B7MQ97	A0A0B7N3P4	WD_REPEATS_REGION domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.987
A0A0B7MQ97	A0A0B7N9H8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.982
A0A0B7MQ97	A0A0B7NEI8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.985
A0A0B7MQ97	A0A0B7NKJ1	WD_REPEATS_REGION domain-containing protein.	Elp3 domain-containing protein.	0.976
A0A0B7MQ97	A0A0B7NTV9	WD_REPEATS_REGION domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.984
A0A0B7MQW3	A0A0B7MQ97	Ribosomal_S17_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.984
A0A0B7MQW3	A0A0B7MWW2	Ribosomal_S17_N domain-containing protein.	Uncharacterized protein.	0.999
A0A0B7MQW3	A0A0B7N349	Ribosomal_S17_N domain-containing protein.	Uncharacterized protein.	0.999
A0A0B7MQW3	A0A0B7N3E3	Ribosomal_S17_N domain-containing protein.	Uncharacterized protein.	0.787
A0A0B7MQW3	A0A0B7N3P4	Ribosomal_S17_N domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A0B7MQW3	A0A0B7N9H8	Ribosomal_S17_N domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
A0A0B7MQW3	A0A0B7NEI8	Ribosomal_S17_N domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A0B7MQW3	A0A0B7NEM0	Ribosomal_S17_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.984
A0A0B7MQW3	A0A0B7NKJ1	Ribosomal_S17_N domain-containing protein.	Elp3 domain-containing protein.	0.999
A0A0B7MQW3	A0A0B7NTV9	Ribosomal_S17_N domain-containing protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
A0A0B7MWW2	A0A0B7MQ97	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.982