STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0B7N716Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
A0A0B7MV69
Uncharacterized protein.
  
 0.822
A0A0B7NNN5
Uncharacterized protein.
  
 0.822
A0A0B7NNH3
Tyrosine--tRNA ligase.
  
 
 0.622
A0A0B7NHW3
Uncharacterized protein.
    
 
 0.598
A0A0B7N610
Uncharacterized protein.
  
   0.555
A0A0B7NV69
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.555
A0A0B7N2U4
RNB domain-containing protein.
  
 0.551
A0A0B7N4N7
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 0.551
A0A0B7NDK6
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 0.551
A0A0B7NMF9
Uncharacterized protein; Belongs to the RNR ribonuclease family.
  
 0.551
Your Current Organism:
Parasitella parasitica
NCBI taxonomy Id: 35722
Other names: P. parasitica, Parasitella simplex
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