STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001063355_00892Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_001063355_03624
Unannotated protein.
 
     0.582
GCA_001063355_00878
Unannotated protein.
   
    0.565
GCA_001063355_00891
Unannotated protein.
     
 0.509
GCA_001063355_02725
Unannotated protein.
 
    0.500
GCA_001063355_00893
Unannotated protein.
       0.483
GCA_001063355_00894
Unannotated protein.
    
  0.467
GCA_001063355_00890
Unannotated protein.
       0.410
Your Current Organism:
Franconibacter helveticus
NCBI taxonomy Id: 357240
Other names: Cronobacter helveticus, Cronobacter helveticus (Stephan et al. 2007) Brady et al. 2013, DSM 18396, Enterobacter helveticus, Enterobacter helveticus Stephan et al. 2007, F. helveticus, Franconibacter helveticus (Stephan et al. 2007) Stephan et al. 2014, JCM 16470, LMG 23732, LMG:23732, fruit powder bacterium 513/05, fruit powder bacterium 603/05, strain 513/05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.