STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001063355_02040Unannotated protein. (314 aa)    
Predicted Functional Partners:
GCA_001063355_02401
Unannotated protein.
  
   
 0.809
GCA_001063355_02319
Unannotated protein.
  
     0.774
GCA_001063355_02720
Unannotated protein.
  
     0.774
GCA_001063355_00017
Unannotated protein.
  
     0.773
GCA_001063355_02238
Unannotated protein.
  
     0.773
GCA_001063355_03707
Unannotated protein.
  
     0.771
GCA_001063355_00553
Unannotated protein.
  
     0.770
GCA_001063355_01090
Unannotated protein.
  
     0.767
GCA_001063355_01923
Unannotated protein.
  
     0.766
GCA_001063355_04084
Unannotated protein.
  
     0.765
Your Current Organism:
Franconibacter helveticus
NCBI taxonomy Id: 357240
Other names: Cronobacter helveticus, Cronobacter helveticus (Stephan et al. 2007) Brady et al. 2013, DSM 18396, Enterobacter helveticus, Enterobacter helveticus Stephan et al. 2007, F. helveticus, Franconibacter helveticus (Stephan et al. 2007) Stephan et al. 2014, JCM 16470, LMG 23732, LMG:23732, fruit powder bacterium 513/05, fruit powder bacterium 603/05, strain 513/05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.