STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001063355_03677Unannotated protein. (284 aa)    
Predicted Functional Partners:
GCA_001063355_03584
Unannotated protein.
  
 0.976
GCA_001063355_03493
Unannotated protein.
    
 
 0.927
GCA_001063355_01268
Unannotated protein.
 
 
 0.909
GCA_001063355_01801
Unannotated protein.
    
 
 0.886
GCA_001063355_00054
Unannotated protein.
  
 
 0.875
GCA_001063355_01595
Unannotated protein.
  
 
 0.848
GCA_001063355_03694
Unannotated protein.
  
 
 0.838
GCA_001063355_01596
Unannotated protein.
  
  
 0.830
GCA_001063355_03274
Unannotated protein.
  
  
 0.826
GCA_001063355_03480
Unannotated protein.
    
 0.789
Your Current Organism:
Franconibacter helveticus
NCBI taxonomy Id: 357240
Other names: Cronobacter helveticus, Cronobacter helveticus (Stephan et al. 2007) Brady et al. 2013, DSM 18396, Enterobacter helveticus, Enterobacter helveticus Stephan et al. 2007, F. helveticus, Franconibacter helveticus (Stephan et al. 2007) Stephan et al. 2014, JCM 16470, LMG 23732, LMG:23732, fruit powder bacterium 513/05, fruit powder bacterium 603/05, strain 513/05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.