STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virD4Type IV secretion system protein. (590 aa)    
Predicted Functional Partners:
virB10
Type IV secretion system protein.
 
 
 
 0.994
virB8
Type IV secretion system protein.
 
   
 0.987
virB4
Type IV secretion system protein.
 
  
 0.954
virB9
Type IV secretion system protein.
 
   
 0.952
virB3
Type IV secretion system protein.
 
   
 0.952
virB11
Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
   
 0.916
trbG/virB9
Conjugal transfer protein.
 
   
 0.900
virB4-2
virB4 protein precursor.
 
  
 0.859
virB6-2
Type IV secretion system protein.
 
   
 0.820
virB6-3
Type IV secretion system protein.
 
   
 0.746
Your Current Organism:
Orientia tsutsugamushi
NCBI taxonomy Id: 357244
Other names: O. tsutsugamushi str. Boryong, Orientia tsutsugamushi Boryong, Orientia tsutsugamushi str. Boryong, Orientia tsutsugamushi strain Boryong
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.