Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dam2 | gmpk | OTBS_0126 | OTBS_0788 | Transposase and inactivated derivative; Submitted as non-pseudo. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.532 |
dam2 | spoT15 | OTBS_0126 | OTBS_0729 | Transposase and inactivated derivative; Submitted as non-pseudo. | spoT-like ppGpp hydrolase. | 0.572 |
dam2 | traD_F | OTBS_0126 | OTBS_0113 | Transposase and inactivated derivative; Submitted as non-pseudo. | Conjugative transfer protein. | 0.513 |
gmpk | dam2 | OTBS_0788 | OTBS_0126 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.532 |
gmpk | spoT15 | OTBS_0788 | OTBS_0729 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | spoT-like ppGpp hydrolase. | 0.951 |
gmpk | traD_F | OTBS_0788 | OTBS_0113 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Conjugative transfer protein. | 0.507 |
spoT15 | dam2 | OTBS_0729 | OTBS_0126 | spoT-like ppGpp hydrolase. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.572 |
spoT15 | gmpk | OTBS_0729 | OTBS_0788 | spoT-like ppGpp hydrolase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.951 |
spoT15 | traD_F | OTBS_0729 | OTBS_0113 | spoT-like ppGpp hydrolase. | Conjugative transfer protein. | 0.506 |
tpr1B2 | traD_F | OTBS_0112 | OTBS_0113 | Conjugative transfer protein. | Conjugative transfer protein. | 0.775 |
traD_F | dam2 | OTBS_0113 | OTBS_0126 | Conjugative transfer protein. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.513 |
traD_F | gmpk | OTBS_0113 | OTBS_0788 | Conjugative transfer protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.507 |
traD_F | spoT15 | OTBS_0113 | OTBS_0729 | Conjugative transfer protein. | spoT-like ppGpp hydrolase. | 0.506 |
traD_F | tpr1B2 | OTBS_0113 | OTBS_0112 | Conjugative transfer protein. | Conjugative transfer protein. | 0.775 |
traD_F | traW | OTBS_0113 | OTBS_0715 | Conjugative transfer protein. | Conjugative transfer protein. | 0.482 |
traD_F | traW-2 | OTBS_0113 | OTBS_1295 | Conjugative transfer protein. | Conjugative transfer protein. | 0.482 |
traD_F | traW-3 | OTBS_0113 | OTBS_1481 | Conjugative transfer protein. | Conjugative transfer protein. | 0.482 |
traD_F | traW-5 | OTBS_0113 | OTBS_2072 | Conjugative transfer protein. | Conjugative transfer protein. | 0.482 |
traD_F | virB10 | OTBS_0113 | OTBS_0005 | Conjugative transfer protein. | Type IV secretion system protein. | 0.728 |
traD_F | virB11 | OTBS_0113 | OTBS_0006 | Conjugative transfer protein. | Type IV secretion system protein; Part of the Type IV secretion system. Belongs to the GSP E family. | 0.535 |
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