Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aas | cdsA | OTBS_1706 | OTBS_0267 | spoT-like ppGpp hydrolase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.610 |
aas | gpsA | OTBS_1706 | OTBS_1307 | spoT-like ppGpp hydrolase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.774 |
aas | pgpA | OTBS_1706 | OTBS_0342 | spoT-like ppGpp hydrolase. | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.676 |
aas | pgsA | OTBS_1706 | OTBS_1929 | spoT-like ppGpp hydrolase. | Exodeoxyribonuclease III; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.819 |
aas | polA | OTBS_1706 | OTBS_1022 | spoT-like ppGpp hydrolase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.542 |
aas | psd | OTBS_1706 | OTBS_0145 | spoT-like ppGpp hydrolase. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.972 |
aas | pssA | OTBS_1706 | OTBS_0146 | spoT-like ppGpp hydrolase. | CDP-diacylglycerol--serineO- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.918 |
aas | tnB-12 | OTBS_1706 | OTBS_1967 | spoT-like ppGpp hydrolase. | Transposase and inactivated derivative. | 0.970 |
cdsA | aas | OTBS_0267 | OTBS_1706 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | spoT-like ppGpp hydrolase. | 0.610 |
cdsA | gpsA | OTBS_0267 | OTBS_1307 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.680 |
cdsA | pgpA | OTBS_0267 | OTBS_0342 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.662 |
cdsA | pgsA | OTBS_0267 | OTBS_1929 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Exodeoxyribonuclease III; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.979 |
cdsA | plsC | OTBS_0267 | OTBS_0216 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.963 |
cdsA | psd | OTBS_0267 | OTBS_0145 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.821 |
cdsA | pssA | OTBS_0267 | OTBS_0146 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | CDP-diacylglycerol--serineO- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.979 |
cdsA | tnB-12 | OTBS_0267 | OTBS_1967 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Transposase and inactivated derivative. | 0.955 |
dsbB | polA | OTBS_0143 | OTBS_1022 | Disulfide bond formation protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.613 |
dsbB | psd | OTBS_0143 | OTBS_0145 | Disulfide bond formation protein. | Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.561 |
dsbB | pssA | OTBS_0143 | OTBS_0146 | Disulfide bond formation protein. | CDP-diacylglycerol--serineO- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.457 |
gpsA | aas | OTBS_1307 | OTBS_1706 | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | spoT-like ppGpp hydrolase. | 0.774 |
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