Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTBS_0219 | OTBS_0220 | OTBS_0219 | OTBS_0220 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.941 |
OTBS_0219 | OTBS_0436 | OTBS_0219 | OTBS_0436 | Conserved hypothetical protein. | Putative membrane-associated zinc-dependent metalloprotease. | 0.514 |
OTBS_0219 | OTBS_1221 | OTBS_0219 | OTBS_1221 | Conserved hypothetical protein. | Hypothetical protein. | 0.456 |
OTBS_0219 | atrC1 | OTBS_0219 | OTBS_1417 | Conserved hypothetical protein. | Cationic amino acid transporter-1. | 0.516 |
OTBS_0219 | ispZ | OTBS_0219 | OTBS_0218 | Conserved hypothetical protein. | Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.786 |
OTBS_0219 | panF | OTBS_0219 | OTBS_0515 | Conserved hypothetical protein. | Transposase and inactivated derivative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.518 |
OTBS_0219 | panF-2 | OTBS_0219 | OTBS_1023 | Conserved hypothetical protein. | Sodium/pantothenate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.518 |
OTBS_0219 | recR | OTBS_0219 | OTBS_0217 | Conserved hypothetical protein. | Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.543 |
OTBS_0219 | tolQ | OTBS_0219 | OTBS_1223 | Conserved hypothetical protein. | Transport protein. | 0.600 |
OTBS_0219 | trxA | OTBS_0219 | OTBS_0434 | Conserved hypothetical protein. | RNA-directed DNA polymerase (Reverse transcriptase); Belongs to the thioredoxin family. | 0.517 |
OTBS_0220 | OTBS_0219 | OTBS_0220 | OTBS_0219 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.941 |
OTBS_0220 | ispZ | OTBS_0220 | OTBS_0218 | Conserved hypothetical protein. | Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. | 0.697 |
OTBS_0220 | recR | OTBS_0220 | OTBS_0217 | Conserved hypothetical protein. | Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.487 |
OTBS_0436 | OTBS_0219 | OTBS_0436 | OTBS_0219 | Putative membrane-associated zinc-dependent metalloprotease. | Conserved hypothetical protein. | 0.514 |
OTBS_0436 | trxA | OTBS_0436 | OTBS_0434 | Putative membrane-associated zinc-dependent metalloprotease. | RNA-directed DNA polymerase (Reverse transcriptase); Belongs to the thioredoxin family. | 0.867 |
OTBS_1221 | OTBS_0219 | OTBS_1221 | OTBS_0219 | Hypothetical protein. | Conserved hypothetical protein. | 0.456 |
OTBS_1221 | tolQ | OTBS_1221 | OTBS_1223 | Hypothetical protein. | Transport protein. | 0.995 |
atrC1 | OTBS_0219 | OTBS_1417 | OTBS_0219 | Cationic amino acid transporter-1. | Conserved hypothetical protein. | 0.516 |
atrC1 | panF | OTBS_1417 | OTBS_0515 | Cationic amino acid transporter-1. | Transposase and inactivated derivative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.537 |
atrC1 | panF-2 | OTBS_1417 | OTBS_1023 | Cationic amino acid transporter-1. | Sodium/pantothenate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.537 |
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