Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acpP | ank1C1 | OTBS_0382 | OTBS_0098 | Acyl carrier protein. | Conserved hypothetical protein. | 0.531 |
acpP | ank1C10 | OTBS_0382 | OTBS_1241 | Acyl carrier protein. | RNA-directed DNA polymerase (Reverse transcriptase). | 0.531 |
acpP | ank1C12 | OTBS_0382 | OTBS_1753 | Acyl carrier protein. | Ankyrin repeat protein with 5 ankyrin repeats. | 0.531 |
acpP | ank1C3 | OTBS_0382 | OTBS_0476 | Acyl carrier protein. | Ankyrin repeat protein with 5 ankyrin repeats. | 0.531 |
acpP | ank1D1 | OTBS_0382 | OTBS_0071 | Acyl carrier protein. | Conjugative transfer protein. | 0.840 |
acpP | ank1u1 | OTBS_0382 | OTBS_0084 | Acyl carrier protein. | RNA-directed DNA polymerase (Reverse transcriptase). | 0.531 |
acpP | ank1u2 | OTBS_0382 | OTBS_0246 | Acyl carrier protein. | Ankyrin repeat protein with 4 ankyrin repeats. | 0.531 |
acpP | ank1u9 | OTBS_0382 | OTBS_2178 | Acyl carrier protein. | Conjugative transfer protein. | 0.531 |
acpP | gmpk | OTBS_0382 | OTBS_0788 | Acyl carrier protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.423 |
acpP | htrA | OTBS_0382 | OTBS_1837 | Acyl carrier protein. | Periplasmic serine protease. | 0.441 |
ank1C1 | acpP | OTBS_0098 | OTBS_0382 | Conserved hypothetical protein. | Acyl carrier protein. | 0.531 |
ank1C1 | ank1u1 | OTBS_0098 | OTBS_0084 | Conserved hypothetical protein. | RNA-directed DNA polymerase (Reverse transcriptase). | 0.740 |
ank1C1 | ank1u2 | OTBS_0098 | OTBS_0246 | Conserved hypothetical protein. | Ankyrin repeat protein with 4 ankyrin repeats. | 0.716 |
ank1C1 | ank1u9 | OTBS_0098 | OTBS_2178 | Conserved hypothetical protein. | Conjugative transfer protein. | 0.703 |
ank1C1 | gmpk | OTBS_0098 | OTBS_0788 | Conserved hypothetical protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.532 |
ank1C1 | htrA | OTBS_0098 | OTBS_1837 | Conserved hypothetical protein. | Periplasmic serine protease. | 0.429 |
ank1C10 | acpP | OTBS_1241 | OTBS_0382 | RNA-directed DNA polymerase (Reverse transcriptase). | Acyl carrier protein. | 0.531 |
ank1C10 | ank1u1 | OTBS_1241 | OTBS_0084 | RNA-directed DNA polymerase (Reverse transcriptase). | RNA-directed DNA polymerase (Reverse transcriptase). | 0.738 |
ank1C10 | ank1u2 | OTBS_1241 | OTBS_0246 | RNA-directed DNA polymerase (Reverse transcriptase). | Ankyrin repeat protein with 4 ankyrin repeats. | 0.711 |
ank1C10 | ank1u9 | OTBS_1241 | OTBS_2178 | RNA-directed DNA polymerase (Reverse transcriptase). | Conjugative transfer protein. | 0.715 |
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