STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hkp11Transposase and inactivated derivative. (234 aa)    
Predicted Functional Partners:
hkp12
Putative signal transduction histidine kinase.
 
 
0.957
hkp35
Putative signal transduction histidine kinase.
 
 
0.833
tnE-10
Hypothetical protein.
 
 
 0.729
hkp25
spoT-like ppGpp hydrolase.
 
 
0.681
hkp28
Putative signal transduction histidine kinase.
 
 
0.681
hkp45
Putative signal transduction histidine kinase.
 
 
0.681
hkp24
Putative signal transduction histidine kinase.
 
 
 
0.608
hkp38
Putative signal transduction histidine kinase.
 
 
 
0.608
phoB
PhoB-like response regulator.
  
 
 0.606
czcR
Transposase and inactivated derivative.
  
 
 0.606
Your Current Organism:
Orientia tsutsugamushi
NCBI taxonomy Id: 357244
Other names: O. tsutsugamushi str. Boryong, Orientia tsutsugamushi Boryong, Orientia tsutsugamushi str. Boryong, Orientia tsutsugamushi strain Boryong
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.