Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dam2 | gmpk | OTBS_0126 | OTBS_0788 | Transposase and inactivated derivative; Submitted as non-pseudo. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.532 |
| dam2 | spoT15 | OTBS_0126 | OTBS_0729 | Transposase and inactivated derivative; Submitted as non-pseudo. | spoT-like ppGpp hydrolase. | 0.572 |
| dam2 | traD_F | OTBS_0126 | OTBS_0113 | Transposase and inactivated derivative; Submitted as non-pseudo. | Conjugative transfer protein. | 0.513 |
| dam2 | traD_F-3 | OTBS_0126 | OTBS_0826 | Transposase and inactivated derivative; Submitted as non-pseudo. | Transposase and inactivated derivative. | 0.513 |
| gmpk | dam2 | OTBS_0788 | OTBS_0126 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transposase and inactivated derivative; Submitted as non-pseudo. | 0.532 |
| gmpk | ndk | OTBS_0788 | OTBS_1862 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.946 |
| gmpk | nrdA | OTBS_0788 | OTBS_0026 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.917 |
| gmpk | nrdB | OTBS_0788 | OTBS_0027 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.905 |
| gmpk | spoT15 | OTBS_0788 | OTBS_0729 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | spoT-like ppGpp hydrolase. | 0.951 |
| gmpk | traD_F | OTBS_0788 | OTBS_0113 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Conjugative transfer protein. | 0.507 |
| gmpk | traD_F-3 | OTBS_0788 | OTBS_0826 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transposase and inactivated derivative. | 0.507 |
| gppA | spoT15 | OTBS_0465 | OTBS_0729 | Transposase and inactivated derivative. | spoT-like ppGpp hydrolase. | 0.907 |
| ndk | gmpk | OTBS_1862 | OTBS_0788 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.946 |
| ndk | nrdA | OTBS_1862 | OTBS_0026 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.928 |
| ndk | nrdB | OTBS_1862 | OTBS_0027 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.922 |
| ndk | spoT15 | OTBS_1862 | OTBS_0729 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | spoT-like ppGpp hydrolase. | 0.902 |
| ndk | spoT33 | OTBS_1862 | OTBS_1558 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | spoT-like ppGpp synthetase. | 0.555 |
| nrdA | gmpk | OTBS_0026 | OTBS_0788 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.917 |
| nrdA | ndk | OTBS_0026 | OTBS_1862 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.928 |
| nrdA | nrdB | OTBS_0026 | OTBS_0027 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
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