Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acpP | ank1C7 | OTBS_0382 | OTBS_1052 | Acyl carrier protein. | Ankyrin repeat protein with 6 ankyrin repeats. | 0.531 |
acpP | ank1u1 | OTBS_0382 | OTBS_0084 | Acyl carrier protein. | RNA-directed DNA polymerase (Reverse transcriptase). | 0.531 |
acpP | gmpk | OTBS_0382 | OTBS_0788 | Acyl carrier protein. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.423 |
ank1C7 | acpP | OTBS_1052 | OTBS_0382 | Ankyrin repeat protein with 6 ankyrin repeats. | Acyl carrier protein. | 0.531 |
ank1C7 | ank1u1 | OTBS_1052 | OTBS_0084 | Ankyrin repeat protein with 6 ankyrin repeats. | RNA-directed DNA polymerase (Reverse transcriptase). | 0.747 |
ank1C7 | dnaK | OTBS_1052 | OTBS_0704 | Ankyrin repeat protein with 6 ankyrin repeats. | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.522 |
ank1C7 | gmpk | OTBS_1052 | OTBS_0788 | Ankyrin repeat protein with 6 ankyrin repeats. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.532 |
ank1C7 | hscA | OTBS_1052 | OTBS_1102 | Ankyrin repeat protein with 6 ankyrin repeats. | Heat shock chaperone protein hscA; Belongs to the heat shock protein 70 family. | 0.522 |
ank1C7 | rhp2-2 | OTBS_1052 | OTBS_0047 | Ankyrin repeat protein with 6 ankyrin repeats. | Transposase and inactivated derivative. | 0.515 |
ank1C7 | rhp6-5 | OTBS_1052 | OTBS_1053 | Ankyrin repeat protein with 6 ankyrin repeats. | Putative ompA-like autotransporter. | 0.533 |
ank1C7 | tpr1A2 | OTBS_1052 | OTBS_0121 | Ankyrin repeat protein with 6 ankyrin repeats. | Tetratricopeptide repeat protein with 1 trp repeats. | 0.515 |
ank1C7 | tpr1B1 | OTBS_1052 | OTBS_0106 | Ankyrin repeat protein with 6 ankyrin repeats. | Transposase and inactivated derivative. | 0.516 |
ank1C7 | tpr1B2 | OTBS_1052 | OTBS_0112 | Ankyrin repeat protein with 6 ankyrin repeats. | Conjugative transfer protein. | 0.515 |
ank1u1 | acpP | OTBS_0084 | OTBS_0382 | RNA-directed DNA polymerase (Reverse transcriptase). | Acyl carrier protein. | 0.531 |
ank1u1 | ank1C7 | OTBS_0084 | OTBS_1052 | RNA-directed DNA polymerase (Reverse transcriptase). | Ankyrin repeat protein with 6 ankyrin repeats. | 0.747 |
ank1u1 | dnaK | OTBS_0084 | OTBS_0704 | RNA-directed DNA polymerase (Reverse transcriptase). | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.522 |
ank1u1 | gmpk | OTBS_0084 | OTBS_0788 | RNA-directed DNA polymerase (Reverse transcriptase). | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.532 |
ank1u1 | hscA | OTBS_0084 | OTBS_1102 | RNA-directed DNA polymerase (Reverse transcriptase). | Heat shock chaperone protein hscA; Belongs to the heat shock protein 70 family. | 0.522 |
ank1u1 | rhp2-2 | OTBS_0084 | OTBS_0047 | RNA-directed DNA polymerase (Reverse transcriptase). | Transposase and inactivated derivative. | 0.515 |
ank1u1 | tpr1A2 | OTBS_0084 | OTBS_0121 | RNA-directed DNA polymerase (Reverse transcriptase). | Tetratricopeptide repeat protein with 1 trp repeats. | 0.515 |
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