Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OTBS_1710 | cyaY | OTBS_1710 | OTBS_0996 | Conserved hypothetical protein. | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | 0.699 |
OTBS_1710 | fdxB | OTBS_1710 | OTBS_1101 | Conserved hypothetical protein. | Transposase and inactivated derivative. | 0.632 |
OTBS_1710 | hscB | OTBS_1710 | OTBS_1103 | Conserved hypothetical protein. | Co-chaperone protein; Belongs to the HscB family. | 0.453 |
OTBS_1710 | iscA | OTBS_1710 | OTBS_0572 | Conserved hypothetical protein. | Iron-binding protein IscA/HesB; Belongs to the HesB/IscA family. | 0.781 |
OTBS_1710 | iscA-2 | OTBS_1710 | OTBS_1104 | Conserved hypothetical protein. | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | 0.809 |
OTBS_1710 | iscR | OTBS_1710 | OTBS_1107 | Conserved hypothetical protein. | Cysteine desulfurase IscS. | 0.486 |
OTBS_1710 | iscU | OTBS_1710 | OTBS_1105 | Conserved hypothetical protein. | FeS cluster assembly scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.880 |
cyaY | OTBS_1710 | OTBS_0996 | OTBS_1710 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Conserved hypothetical protein. | 0.699 |
cyaY | dnaK | OTBS_0996 | OTBS_0704 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.644 |
cyaY | fdxB | OTBS_0996 | OTBS_1101 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Transposase and inactivated derivative. | 0.998 |
cyaY | hscA | OTBS_0996 | OTBS_1102 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Heat shock chaperone protein hscA; Belongs to the heat shock protein 70 family. | 0.690 |
cyaY | hscB | OTBS_0996 | OTBS_1103 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Co-chaperone protein; Belongs to the HscB family. | 0.666 |
cyaY | iscR | OTBS_0996 | OTBS_1107 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | Cysteine desulfurase IscS. | 0.600 |
cyaY | iscU | OTBS_0996 | OTBS_1105 | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | FeS cluster assembly scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.999 |
dnaK | cyaY | OTBS_0704 | OTBS_0996 | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Putative iron-binding and oxidizing protein; Belongs to the frataxin family. | 0.644 |
dnaK | fdxB | OTBS_0704 | OTBS_1101 | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Transposase and inactivated derivative. | 0.737 |
dnaK | hscB | OTBS_0704 | OTBS_1103 | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Co-chaperone protein; Belongs to the HscB family. | 0.885 |
dnaK | iscA-2 | OTBS_0704 | OTBS_1104 | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. | 0.629 |
dnaK | iscU | OTBS_0704 | OTBS_1105 | Chaperone protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | FeS cluster assembly scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. | 0.896 |
fdxB | OTBS_1710 | OTBS_1101 | OTBS_1710 | Transposase and inactivated derivative. | Conserved hypothetical protein. | 0.632 |
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