STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traN-7Conjugative pilus assembly protein. (553 aa)    
Predicted Functional Partners:
traU
Conjugative transfer protein.
 
   
 0.887
traW
Conjugative transfer protein.
 
   
 0.778
traW-2
Conjugative transfer protein.
 
   
 0.778
traW-3
Conjugative transfer protein.
 
   
 0.778
traW-5
Conjugative transfer protein.
 
   
 0.778
traB-23
Conjugative pilus assembly protein.
 
     0.777
traF-4
Conjugative transfer protein.
 
     0.771
traF-5
Conjugative transfer protein.
 
     0.771
trbC-16
Conjugative transfer protein.
       0.714
traC-3
Conjugative transfer protein.
 
   
 0.708
Your Current Organism:
Orientia tsutsugamushi
NCBI taxonomy Id: 357244
Other names: O. tsutsugamushi str. Boryong, Orientia tsutsugamushi Boryong, Orientia tsutsugamushi str. Boryong, Orientia tsutsugamushi strain Boryong
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.