Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
tchA-21 | tchB-19 | OTBS_1727 | OTBS_1729 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
tchA-21 | traB-19 | OTBS_1727 | OTBS_1730 | Conserved hypothetical protein. | Conjugative pilus assembly protein. | 0.511 |
tchA-21 | traE-11 | OTBS_1727 | OTBS_1728 | Conserved hypothetical protein. | Conjugative transfer protein. | 0.776 |
tchA-21 | traV-21 | OTBS_1727 | OTBS_1731 | Conserved hypothetical protein. | Conjugative transfer protein. | 0.511 |
tchB-19 | tchA-21 | OTBS_1729 | OTBS_1727 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.773 |
tchB-19 | traB-19 | OTBS_1729 | OTBS_1730 | Conserved hypothetical protein. | Conjugative pilus assembly protein. | 0.519 |
tchB-19 | traE-11 | OTBS_1729 | OTBS_1728 | Conserved hypothetical protein. | Conjugative transfer protein. | 0.776 |
tchB-19 | traV-21 | OTBS_1729 | OTBS_1731 | Conserved hypothetical protein. | Conjugative transfer protein. | 0.511 |
traB-19 | tchA-21 | OTBS_1730 | OTBS_1727 | Conjugative pilus assembly protein. | Conserved hypothetical protein. | 0.511 |
traB-19 | tchB-19 | OTBS_1730 | OTBS_1729 | Conjugative pilus assembly protein. | Conserved hypothetical protein. | 0.519 |
traB-19 | traE-11 | OTBS_1730 | OTBS_1728 | Conjugative pilus assembly protein. | Conjugative transfer protein. | 0.512 |
traB-19 | traV-21 | OTBS_1730 | OTBS_1731 | Conjugative pilus assembly protein. | Conjugative transfer protein. | 0.773 |
traE-11 | tchA-21 | OTBS_1728 | OTBS_1727 | Conjugative transfer protein. | Conserved hypothetical protein. | 0.776 |
traE-11 | tchB-19 | OTBS_1728 | OTBS_1729 | Conjugative transfer protein. | Conserved hypothetical protein. | 0.776 |
traE-11 | traB-19 | OTBS_1728 | OTBS_1730 | Conjugative transfer protein. | Conjugative pilus assembly protein. | 0.512 |
traE-11 | traV-21 | OTBS_1728 | OTBS_1731 | Conjugative transfer protein. | Conjugative transfer protein. | 0.511 |
traV-21 | tchA-21 | OTBS_1731 | OTBS_1727 | Conjugative transfer protein. | Conserved hypothetical protein. | 0.511 |
traV-21 | tchB-19 | OTBS_1731 | OTBS_1729 | Conjugative transfer protein. | Conserved hypothetical protein. | 0.511 |
traV-21 | traB-19 | OTBS_1731 | OTBS_1730 | Conjugative transfer protein. | Conjugative pilus assembly protein. | 0.773 |
traV-21 | traE-11 | OTBS_1731 | OTBS_1728 | Conjugative transfer protein. | Conjugative transfer protein. | 0.511 |