Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
trbG/virB9 | virB10 | OTBS_0338 | OTBS_0005 | Conjugal transfer protein. | Type IV secretion system protein. | 0.999 |
trbG/virB9 | virB3 | OTBS_0338 | OTBS_1949 | Conjugal transfer protein. | Type IV secretion system protein. | 0.981 |
trbG/virB9 | virB4 | OTBS_0338 | OTBS_1950 | Conjugal transfer protein. | Type IV secretion system protein. | 0.958 |
trbG/virB9 | virB4-2 | OTBS_0338 | OTBS_0953 | Conjugal transfer protein. | virB4 protein precursor. | 0.917 |
trbG/virB9 | virB6-1 | OTBS_0338 | OTBS_1951 | Conjugal transfer protein. | Type IV secretion system protein. | 0.733 |
trbG/virB9 | virB6-2 | OTBS_0338 | OTBS_1952 | Conjugal transfer protein. | Type IV secretion system protein. | 0.890 |
trbG/virB9 | virB6-4 | OTBS_0338 | OTBS_1954 | Conjugal transfer protein. | Type IV secretion system protein. | 0.766 |
trbG/virB9 | virB8 | OTBS_0338 | OTBS_0003 | Conjugal transfer protein. | Type IV secretion system protein. | 0.982 |
trbG/virB9 | virB9 | OTBS_0338 | OTBS_0004 | Conjugal transfer protein. | Type IV secretion system protein. | 0.916 |
trbG/virB9 | virD4 | OTBS_0338 | OTBS_0007 | Conjugal transfer protein. | Type IV secretion system protein. | 0.900 |
virB10 | trbG/virB9 | OTBS_0005 | OTBS_0338 | Type IV secretion system protein. | Conjugal transfer protein. | 0.999 |
virB10 | virB3 | OTBS_0005 | OTBS_1949 | Type IV secretion system protein. | Type IV secretion system protein. | 0.990 |
virB10 | virB4 | OTBS_0005 | OTBS_1950 | Type IV secretion system protein. | Type IV secretion system protein. | 0.982 |
virB10 | virB4-2 | OTBS_0005 | OTBS_0953 | Type IV secretion system protein. | virB4 protein precursor. | 0.931 |
virB10 | virB6-1 | OTBS_0005 | OTBS_1951 | Type IV secretion system protein. | Type IV secretion system protein. | 0.846 |
virB10 | virB6-2 | OTBS_0005 | OTBS_1952 | Type IV secretion system protein. | Type IV secretion system protein. | 0.930 |
virB10 | virB6-4 | OTBS_0005 | OTBS_1954 | Type IV secretion system protein. | Type IV secretion system protein. | 0.862 |
virB10 | virB8 | OTBS_0005 | OTBS_0003 | Type IV secretion system protein. | Type IV secretion system protein. | 0.997 |
virB10 | virB9 | OTBS_0005 | OTBS_0004 | Type IV secretion system protein. | Type IV secretion system protein. | 0.998 |
virB10 | virD4 | OTBS_0005 | OTBS_0007 | Type IV secretion system protein. | Type IV secretion system protein. | 0.994 |
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