Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gmpk | ndk | OTBS_0788 | OTBS_1862 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.946 |
| gmpk | nrdA | OTBS_0788 | OTBS_0026 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.917 |
| gmpk | nrdB | OTBS_0788 | OTBS_0027 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.905 |
| gmpk | spoT44 | OTBS_0788 | OTBS_1974 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Hypothetical protein. | 0.906 |
| gppA | hkp38 | OTBS_0465 | OTBS_1975 | Transposase and inactivated derivative. | Putative signal transduction histidine kinase. | 0.426 |
| gppA | spoT44 | OTBS_0465 | OTBS_1974 | Transposase and inactivated derivative. | Hypothetical protein. | 0.907 |
| hkp38 | gppA | OTBS_1975 | OTBS_0465 | Putative signal transduction histidine kinase. | Transposase and inactivated derivative. | 0.426 |
| hkp38 | hkp39 | OTBS_1975 | OTBS_1976 | Putative signal transduction histidine kinase. | Putative signal transduction histidine kinase. | 0.999 |
| hkp38 | spoT44 | OTBS_1975 | OTBS_1974 | Putative signal transduction histidine kinase. | Hypothetical protein. | 0.580 |
| hkp39 | hkp38 | OTBS_1976 | OTBS_1975 | Putative signal transduction histidine kinase. | Putative signal transduction histidine kinase. | 0.999 |
| hkp39 | spoT44 | OTBS_1976 | OTBS_1974 | Putative signal transduction histidine kinase. | Hypothetical protein. | 0.543 |
| ndk | gmpk | OTBS_1862 | OTBS_0788 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.946 |
| ndk | nrdA | OTBS_1862 | OTBS_0026 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.928 |
| ndk | nrdB | OTBS_1862 | OTBS_0027 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.922 |
| ndk | rplB | OTBS_1862 | OTBS_0373 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.847 |
| ndk | spoT33 | OTBS_1862 | OTBS_1558 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | spoT-like ppGpp synthetase. | 0.555 |
| ndk | spoT44 | OTBS_1862 | OTBS_1974 | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Hypothetical protein. | 0.902 |
| nrdA | gmpk | OTBS_0026 | OTBS_0788 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.917 |
| nrdA | ndk | OTBS_0026 | OTBS_1862 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Transposase and inactivated derivative; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.928 |
| nrdA | nrdB | OTBS_0026 | OTBS_0027 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
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