STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hkp41Putative signal transduction histidine kinase. (247 aa)    
Predicted Functional Partners:
hkp12
Putative signal transduction histidine kinase.
 
 
0.828
hkp35
Putative signal transduction histidine kinase.
 
 
0.828
hkp40
Putative signal transduction histidine kinase.
      
0.773
hkp25
spoT-like ppGpp hydrolase.
  
 
0.626
hkp28
Putative signal transduction histidine kinase.
  
 
0.626
hkp45
Putative signal transduction histidine kinase.
  
 
0.626
phoB
PhoB-like response regulator.
  
 
 0.586
czcR
Transposase and inactivated derivative.
  
 
 0.586
sucB
Dihydrolipoamide acetyltransferase component.
    
 0.558
OTBS_1347
Hypothetical protein.
    
 0.558
Your Current Organism:
Orientia tsutsugamushi
NCBI taxonomy Id: 357244
Other names: O. tsutsugamushi str. Boryong, Orientia tsutsugamushi Boryong, Orientia tsutsugamushi str. Boryong, Orientia tsutsugamushi strain Boryong
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.