STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO07319.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
KRO07318.1
Hypothetical protein.
       0.668
KRO07317.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like.
 
     0.583
KRO04221.1
Hypothetical protein.
  
     0.558
KRO07321.1
Hypothetical protein.
 
     0.516
KRO05050.1
Hypothetical protein.
  
     0.478
KRO06817.1
Outer membrane protein.
  
     0.467
KRO05051.1
Hypothetical protein.
  
     0.461
KRO06117.1
Hypothetical protein.
  
     0.441
KRO04051.1
Integrase recombinase.
 
     0.441
KRO05712.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.