STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06206.13-hydroxyisobutyrate dehydrogenase. (287 aa)    
Predicted Functional Partners:
KRO07092.1
3-hydroxybutyryl-CoA dehydrogenase.
     
 0.958
KRO07181.1
Phosphotransacetylase.
    
 0.950
KRO05826.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.918
KRO05649.1
acyl-CoA dehydrogenase.
  
 
 0.669
KRO05020.1
Pyrophosphatase.
      0.609
KRO05988.1
Gamma-carboxymuconolactone decarboxylase subunit-like protein.
  
 
 0.598
KRO04229.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
 
 0.583
KRO06576.1
Oxidoreductase.
    
  0.530
KRO06400.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
  
 
 0.526
KRO05376.1
Lactaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.523
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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