STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06238.1ABC-type oligopeptide transport system, periplasmic component. (541 aa)    
Predicted Functional Partners:
KRO06240.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.903
KRO06237.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.901
KRO06239.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.901
KRO06241.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 0.889
KRO06242.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.859
KRO06243.1
ABC-type oligopeptide transport system, ATPase component.
 
 0.834
KRO06863.1
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
 
 0.582
KRO06865.1
ABC-type dipeptide oligopeptide nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.575
KRO05934.1
ABC-type oligopeptide transport system, periplasmic component.
  
  
 
0.556
KRO06861.1
ABC-type oligopeptide transport system, periplasmic component.
  
 
0.555
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.