STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06105.1N-acetylmuramoyl-L-alanine amidase. (415 aa)    
Predicted Functional Partners:
KRO06703.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.961
KRO05378.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.743
KRO05017.1
Hypothetical protein.
  
     0.718
KRO06512.1
Hypothetical protein.
  
     0.696
KRO05041.1
Hypothetical protein.
  
     0.688
KRO06543.1
Hypothetical protein.
  
     0.662
KRO06542.1
Hypothetical protein.
  
     0.661
KRO06868.1
Hypothetical protein.
  
     0.622
KRO05992.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
 
  
 0.611
KRO05042.1
Surface layer protein a.
  
     0.605
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.