Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRO05971.1 | KRO05972.1 | IV61_GL000593 | IV61_GL000594 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.841 |
KRO05971.1 | KRO05974.1 | IV61_GL000593 | IV61_GL000596 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.901 |
KRO05971.1 | ubiX | IV61_GL000593 | IV61_GL000595 | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.720 |
KRO05972.1 | KRO05971.1 | IV61_GL000594 | IV61_GL000593 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.841 |
KRO05972.1 | KRO05974.1 | IV61_GL000594 | IV61_GL000596 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | Hypothetical protein. | 0.998 |
KRO05972.1 | KRO05975.1 | IV61_GL000594 | IV61_GL000597 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | Hypothetical protein. | 0.400 |
KRO05972.1 | ubiX | IV61_GL000594 | IV61_GL000595 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.999 |
KRO05974.1 | KRO05971.1 | IV61_GL000596 | IV61_GL000593 | Hypothetical protein. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.901 |
KRO05974.1 | KRO05972.1 | IV61_GL000596 | IV61_GL000594 | Hypothetical protein. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.998 |
KRO05974.1 | KRO05975.1 | IV61_GL000596 | IV61_GL000597 | Hypothetical protein. | Hypothetical protein. | 0.416 |
KRO05974.1 | ubiX | IV61_GL000596 | IV61_GL000595 | Hypothetical protein. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.996 |
KRO05975.1 | KRO05972.1 | IV61_GL000597 | IV61_GL000594 | Hypothetical protein. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.400 |
KRO05975.1 | KRO05974.1 | IV61_GL000597 | IV61_GL000596 | Hypothetical protein. | Hypothetical protein. | 0.416 |
KRO05975.1 | ubiX | IV61_GL000597 | IV61_GL000595 | Hypothetical protein. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.416 |
ubiX | KRO05971.1 | IV61_GL000595 | IV61_GL000593 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.720 |
ubiX | KRO05972.1 | IV61_GL000595 | IV61_GL000594 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Belongs to the UbiD family. | 0.999 |
ubiX | KRO05974.1 | IV61_GL000595 | IV61_GL000596 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | Hypothetical protein. | 0.996 |
ubiX | KRO05975.1 | IV61_GL000595 | IV61_GL000597 | 3-polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | Hypothetical protein. | 0.416 |