STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05989.1Endoglucanase Y; Belongs to the glycosyl hydrolase 8 (cellulase D) family. (390 aa)    
Predicted Functional Partners:
KRO07106.1
N-acetylglucosaminyltransferase.
  
 
 0.558
KRO05988.1
Gamma-carboxymuconolactone decarboxylase subunit-like protein.
       0.515
KRO05987.1
Double-stranded beta-helix-like protein.
       0.493
KRO05986.1
Transcriptional regulator.
       0.472
KRO05999.1
Beta-glucosidase-related glycosidase.
    
 0.462
KRO06744.1
Membrane-associated Zn-dependent protease 1.
      
 0.461
KRO05706.1
Hypothetical protein.
  
     0.427
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.