STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06011.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KRO06010.1
Lipoate-protein ligase A.
       0.776
KRO06898.1
Hypothetical protein.
  
     0.766
KRO07302.1
Hypothetical protein.
  
     0.764
KRO06877.1
SAM-dependent methyltransferase.
  
     0.755
KRO05460.1
Hypothetical protein.
  
     0.728
KRO05756.1
Hypothetical protein.
  
     0.724
KRO06161.1
Hypothetical protein.
  
     0.700
KRO06878.1
XRE family transcriptional regulator.
  
     0.694
KRO06747.1
Hypothetical protein.
  
     0.679
KRO06945.1
Hypothetical protein.
  
     0.670
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.