STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05879.1livA protein. (398 aa)    
Predicted Functional Partners:
KRO05880.1
Branched-chain amino acid abc transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KRO05881.1
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
KRO05882.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.998
KRO05883.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
 
 0.998
KRO05884.1
Cbs domain protein.
 
     0.830
KRO06978.1
ABC-type amino acid transport system, permease and periplasmic component.
  
 
 0.511
KRO06295.1
Response regulator.
    
 0.489
rpmE2
Ribosomal protein L31.
  
    0.476
KRO07280.1
Coenzyme A disulfide reductase.
  
  
 0.444
KRO06224.1
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
    
  0.422
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.