STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO07131.1Superfamily II DNA RNA helicase. (438 aa)    
Predicted Functional Partners:
KRO07132.1
Amidophosphoribosyltransferase.
  
  
 0.914
KRO06387.1
Metallo-beta-lactamase superfamily hydrolase.
  
  
 0.814
KRO06389.1
DNA uptake protein related DNA-binding protein.
   
  
 0.795
KRO06975.1
Type II secretory pathway competence component, ATPase.
   
  
 0.715
KRO07130.1
Hypothetical protein.
     
 0.668
gpsB
Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
  
     0.630
KRO06974.1
Type II secretory pathway competence component.
   
  
 0.596
KRO06973.1
Hypothetical protein.
  
  
 0.574
KRO06627.1
Rossmann fold nucleotide-binding protein for DNA uptake.
   
  
 0.570
KRO06068.1
Primosome component related protein.
  
     0.569
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.