Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRO05756.1 | KRO05758.1 | IV61_GL000978 | IV61_GL000980 | Hypothetical protein. | Hypothetical protein. | 0.796 |
KRO05756.1 | KRO05759.1 | IV61_GL000978 | IV61_GL000981 | Hypothetical protein. | Spo0J-like protein; Belongs to the ParB family. | 0.768 |
KRO05756.1 | KRO05760.1 | IV61_GL000978 | IV61_GL000982 | Hypothetical protein. | Chromosome partitioning ATPase. | 0.666 |
KRO05756.1 | KRO05761.1 | IV61_GL000978 | IV61_GL000983 | Hypothetical protein. | Spo0J-like protein; Belongs to the ParB family. | 0.654 |
KRO05756.1 | rsmG | IV61_GL000978 | IV61_GL000984 | Hypothetical protein. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.631 |
KRO05756.1 | ychF | IV61_GL000978 | IV61_GL000979 | Hypothetical protein. | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.796 |
KRO05758.1 | KRO05756.1 | IV61_GL000980 | IV61_GL000978 | Hypothetical protein. | Hypothetical protein. | 0.796 |
KRO05758.1 | KRO05759.1 | IV61_GL000980 | IV61_GL000981 | Hypothetical protein. | Spo0J-like protein; Belongs to the ParB family. | 0.792 |
KRO05758.1 | KRO05760.1 | IV61_GL000980 | IV61_GL000982 | Hypothetical protein. | Chromosome partitioning ATPase. | 0.694 |
KRO05758.1 | KRO05761.1 | IV61_GL000980 | IV61_GL000983 | Hypothetical protein. | Spo0J-like protein; Belongs to the ParB family. | 0.671 |
KRO05758.1 | rsmG | IV61_GL000980 | IV61_GL000984 | Hypothetical protein. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.765 |
KRO05758.1 | ychF | IV61_GL000980 | IV61_GL000979 | Hypothetical protein. | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.916 |
KRO05759.1 | KRO05756.1 | IV61_GL000981 | IV61_GL000978 | Spo0J-like protein; Belongs to the ParB family. | Hypothetical protein. | 0.768 |
KRO05759.1 | KRO05758.1 | IV61_GL000981 | IV61_GL000980 | Spo0J-like protein; Belongs to the ParB family. | Hypothetical protein. | 0.792 |
KRO05759.1 | KRO05760.1 | IV61_GL000981 | IV61_GL000982 | Spo0J-like protein; Belongs to the ParB family. | Chromosome partitioning ATPase. | 0.999 |
KRO05759.1 | KRO05761.1 | IV61_GL000981 | IV61_GL000983 | Spo0J-like protein; Belongs to the ParB family. | Spo0J-like protein; Belongs to the ParB family. | 0.906 |
KRO05759.1 | rsmG | IV61_GL000981 | IV61_GL000984 | Spo0J-like protein; Belongs to the ParB family. | 16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.828 |
KRO05759.1 | ychF | IV61_GL000981 | IV61_GL000979 | Spo0J-like protein; Belongs to the ParB family. | GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.839 |
KRO05760.1 | KRO05756.1 | IV61_GL000982 | IV61_GL000978 | Chromosome partitioning ATPase. | Hypothetical protein. | 0.666 |
KRO05760.1 | KRO05758.1 | IV61_GL000982 | IV61_GL000980 | Chromosome partitioning ATPase. | Hypothetical protein. | 0.694 |
page 1 of 3