Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRO05582.1 | KRO05583.1 | IV61_GL001115 | IV61_GL001116 | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Alpha beta hydrolase. | 0.819 |
KRO05582.1 | KRO05584.1 | IV61_GL001115 | IV61_GL001117 | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | HAD superfamily hydrolase. | 0.401 |
KRO05583.1 | KRO05582.1 | IV61_GL001116 | IV61_GL001115 | Alpha beta hydrolase. | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.819 |
KRO05583.1 | KRO05584.1 | IV61_GL001116 | IV61_GL001117 | Alpha beta hydrolase. | HAD superfamily hydrolase. | 0.631 |
KRO05583.1 | KRO05585.1 | IV61_GL001116 | IV61_GL001118 | Alpha beta hydrolase. | Hypothetical protein. | 0.458 |
KRO05583.1 | KRO05588.1 | IV61_GL001116 | IV61_GL001121 | Alpha beta hydrolase. | Alpha beta hydrolase. | 0.514 |
KRO05583.1 | KRO06537.1 | IV61_GL001116 | IV61_GL002254 | Alpha beta hydrolase. | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.683 |
KRO05583.1 | KRO06724.1 | IV61_GL001116 | IV61_GL002066 | Alpha beta hydrolase. | D-alanyl transfer protein. | 0.758 |
KRO05583.1 | KRO06726.1 | IV61_GL001116 | IV61_GL002068 | Alpha beta hydrolase. | D-alanyl transfer protein; Could be involved in the transport of activated D-alanine through the membrane. | 0.703 |
KRO05583.1 | KRO06785.1 | IV61_GL001116 | IV61_GL001874 | Alpha beta hydrolase. | Alpha beta hydrolase. | 0.674 |
KRO05583.1 | dltA | IV61_GL001116 | IV61_GL002069 | Alpha beta hydrolase. | D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to [...] | 0.680 |
KRO05583.1 | dltC | IV61_GL001116 | IV61_GL002067 | Alpha beta hydrolase. | Hypothetical protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. | 0.723 |
KRO05584.1 | KRO05582.1 | IV61_GL001117 | IV61_GL001115 | HAD superfamily hydrolase. | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | 0.401 |
KRO05584.1 | KRO05583.1 | IV61_GL001117 | IV61_GL001116 | HAD superfamily hydrolase. | Alpha beta hydrolase. | 0.631 |
KRO05584.1 | KRO05585.1 | IV61_GL001117 | IV61_GL001118 | HAD superfamily hydrolase. | Hypothetical protein. | 0.551 |
KRO05585.1 | KRO05583.1 | IV61_GL001118 | IV61_GL001116 | Hypothetical protein. | Alpha beta hydrolase. | 0.458 |
KRO05585.1 | KRO05584.1 | IV61_GL001118 | IV61_GL001117 | Hypothetical protein. | HAD superfamily hydrolase. | 0.551 |
KRO05588.1 | KRO05583.1 | IV61_GL001121 | IV61_GL001116 | Alpha beta hydrolase. | Alpha beta hydrolase. | 0.514 |
KRO06537.1 | KRO05583.1 | IV61_GL002254 | IV61_GL001116 | Cellobiose-specific PTS system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. | Alpha beta hydrolase. | 0.683 |
KRO06724.1 | KRO05583.1 | IV61_GL002066 | IV61_GL001116 | D-alanyl transfer protein. | Alpha beta hydrolase. | 0.758 |
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