STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05589.1Thioredoxin reductase. (336 aa)    
Predicted Functional Partners:
KRO05688.1
Thiol-disulfide isomerase and thioredoxin.
  
 0.868
KRO04636.1
Peroxiredoxin.
  
 
 0.860
KRO07002.1
Hypothetical protein.
  
 0.804
KRO06550.1
Thiol-disulfide isomerase and thioredoxin; Belongs to the thioredoxin family.
  
 0.804
KRO07280.1
Coenzyme A disulfide reductase.
    
 0.800
KRO05965.1
Thioredoxin; Belongs to the thioredoxin family.
  
 0.797
KRO06833.1
Arylsulfate sulfotransferase.
  
 0.788
KRO06834.1
Arylsulfate sulfotransferase.
  
 0.788
KRO05288.1
Glutamine synthetase.
    
 0.725
metG
methyonyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
 
 
 0.677
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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