STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06978.1ABC-type amino acid transport system, permease and periplasmic component. (491 aa)    
Predicted Functional Partners:
KRO06979.1
Glutamine ABC transporter, ATP-binding protein.
 0.999
KRO06232.1
ABC-type polar amino acid transport system, ATPase component.
 0.998
KRO07027.1
Glutamine ABC transporter, ATP-binding protein.
 0.994
KRO06233.1
Amino acid ABC transporter substrate-binding protein.
 
 0.837
KRO05391.1
Peptide ABC transporter ATPase.
 
 0.746
KRO07279.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.734
KRO06235.1
ABC-type amino acid transport system, permease component.
 
0.716
KRO06813.1
Peptide ABC transporter ATPase.
 
 0.702
KRO06234.1
ABC-type amino acid transport system, permease component.
 
0.697
KRO07028.1
ABC-type amino acid transport system, permease component.
 
0.694
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.