STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05328.1ABC-type metal ion transport system, periplasmic component surface adhesin. (303 aa)    
Predicted Functional Partners:
KRO06175.1
ABC-type Mn2+ Zn2+ transport system, permease component.
 
 
 0.940
KRO06174.1
ABC-type Mn Zn transport system, ATPase component.
 
 
 0.883
KRO06931.1
Mn-dependent transcriptional regulator.
  
 
 0.651
rpsN
Ribosomal protein S14-2; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.517
rpmB
Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.512
KRO05450.1
Mn-dependent transcriptional regulator.
  
 
 0.466
KRO05329.1
C-di-GMP-specific phosphodiesterase.
       0.466
KRO04648.1
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
    
 0.423
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.