STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05342.1Transcriptional regulator. (233 aa)    
Predicted Functional Partners:
KRO05343.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.888
KRO05683.1
Dipeptidase PepV.
 
     0.616
KRO05341.1
Hypothetical protein.
       0.601
KRO05953.1
AraC family transcriptional regulator.
  
  
 0.480
KRO06826.1
AraC family transcriptional regulator.
  
  
 0.480
KRO05948.1
Imidazolonepropionase related amidohydrolase.
  
 
 0.479
KRO06287.1
Transcriptional regulator.
 
  
 0.454
KRO06414.1
Ribose operon repressor.
  
   
 0.450
KRO06982.1
Catabolite control protein A.
  
   
 0.430
KRO05987.1
Double-stranded beta-helix-like protein.
  
    0.422
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.