STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05313.1ABC-type cobalamin Fe3+-siderophores transport system, ATPase component. (254 aa)    
Predicted Functional Partners:
KRO05314.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
    0.973
KRO05315.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
    0.951
KRO06273.1
ABC-type multidrug transport system, ATPase and permease component.
 
0.930
KRO05316.1
Cell surface protein.
 
     0.927
KRO04203.1
Hypothetical protein.
  
 0.858
KRO05317.1
Cell surface protein.
 
     0.857
KRO06757.1
ABC-type multidrug transport system, ATPase and permease component.
 
0.801
KRO04894.1
ABC-type multidrug transport system, ATPase and permease component.
 
0.722
KRO05881.1
Branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
   
  0.715
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.658
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.