STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05187.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
KRO05186.1
Hypothetical protein.
     0.994
tagH
ABC-type polysaccharide polyol phosphate transport system, ATPase component; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
  
 0.939
KRO06331.1
Hypothetical protein.
  
 
  0.664
KRO06494.1
Multidrug ABC superfamily ATP binding cassette transporter, permease protein.
  
 
  0.664
KRO05188.1
Transcriptional regulator.
 
    0.647
KRO06091.1
ABC-type multidrug transport system, ATPase component.
    
 0.587
KRO05833.1
ABC-type multidrug transport system, ATPase component.
    
 0.587
KRO05313.1
ABC-type cobalamin Fe3+-siderophores transport system, ATPase component.
    
 0.587
KRO06758.1
Hypothetical protein.
    
 0.587
KRO04204.1
ABC transporter, ATP-binding protein.
    
 0.587
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.