STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfTABC-type cobalt transport system, permease component CbiQ related transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (266 aa)    
Predicted Functional Partners:
KRO06038.1
Hypothetical protein.
  
 0.999
KRO07164.1
Hypothetical protein.
 
 
 
 0.999
ecfA
ABC-type cobalt transport system, ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA-2
Cobalt transporter ATP-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
truA
Pseudouridylate synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
 
  
 0.970
KRO05577.1
ABC-type cobalt transport system, ATPase component.
 0.951
KRO06243.1
ABC-type oligopeptide transport system, ATPase component.
 
 0.891
KRO05676.1
ABC-type cobalt transport system, ATPase component.
  
 0.890
KRO06864.1
ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.886
KRO07304.1
ABC-type uncharacterized transport system, ATPase component.
 
      0.805
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.