STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05070.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
KRO05759.1
Spo0J-like protein; Belongs to the ParB family.
  
 
 0.771
KRO05761.1
Spo0J-like protein; Belongs to the ParB family.
  
 
 0.749
KRO04640.1
Hypothetical protein.
  
     0.696
KRO04642.1
Nickase.
 
   
 0.596
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
 
 0.593
KRO07176.1
Hypothetical protein.
 
 
   0.582
KRO06276.1
Hypothetical protein.
 
 
   0.575
KRO06365.1
Hypothetical protein.
 
 
   0.567
KRO04231.1
Nickase.
 
   
 0.564
KRO04641.1
Hypothetical protein.
 
   
 0.547
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.