STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO05085.1Hypothetical protein. (409 aa)    
Predicted Functional Partners:
KRO04313.1
Non-specific protein-tyrosine kinase.
  
 
 0.757
KRO05084.1
Exopolysacharide protein Wzx.
  
  
 0.737
KRO05086.1
Glycosyltransferase.
  
  
 0.732
KRO05083.1
Exopolysacharide protein Wzm.
  
    0.704
KRO04314.1
Hypothetical protein.
  
 
 0.619
KRO05087.1
Hypothetical protein.
  
  
 0.523
KRO06356.1
Serine threonine kinase.
    
 
 0.497
KRO04839.1
Hypothetical protein.
    
   0.495
KRO05088.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
     
 0.448
KRO05089.1
Glycosyl transferase, WecB TagA CpsF family protein; Belongs to the glycosyltransferase 26 family.
       0.443
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.