STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06894.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
KRO06014.1
Hypothetical protein.
  
     0.685
KRO05568.1
Hypothetical protein.
  
     0.677
KRO06543.1
Hypothetical protein.
  
     0.663
KRO06512.1
Hypothetical protein.
  
     0.645
KRO06542.1
Hypothetical protein.
  
     0.642
KRO07190.1
Hypothetical protein.
  
     0.641
KRO06220.1
Metal-dependent membrane protease.
  
     0.623
KRO06877.1
SAM-dependent methyltransferase.
  
     0.608
KRO07302.1
Hypothetical protein.
  
     0.606
KRO05456.1
Hypothetical protein.
  
     0.603
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.