STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO04912.1Hypothetical protein. (486 aa)    
Predicted Functional Partners:
KRO04911.1
PadR family transcriptional regulator.
     0.847
KRO06809.1
Hypothetical protein.
  
     0.733
KRO06276.1
Hypothetical protein.
  
     0.652
KRO05201.1
Quinolone resistance protein.
   
   0.645
KRO06146.1
Major facilitator superfamily permease.
  
     0.616
KRO06808.1
Hypothetical protein.
  
     0.595
KRO05753.1
Teichoic acid polysaccharide glycosyl transferase.
 
     0.585
KRO06713.1
Hypothetical protein.
  
     0.583
KRO07163.1
Hypothetical protein.
 
  
 0.579
KRO06797.1
Hypothetical protein.
  
     0.576
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.