Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRO04629.1 | KRO04630.1 | IV61_GL001969 | IV61_GL001970 | Acetyltransferase. | Transcriptional regulator. | 0.563 |
KRO04629.1 | KRO05592.1 | IV61_GL001969 | IV61_GL001125 | Acetyltransferase. | Acetyltransferase. | 0.766 |
KRO04629.1 | KRO06209.1 | IV61_GL001969 | IV61_GL000356 | Acetyltransferase. | Acetyltransferase. | 0.603 |
KRO04629.1 | KRO07087.1 | IV61_GL001969 | IV61_GL000735 | Acetyltransferase. | Flavoprotein. | 0.448 |
KRO04629.1 | rpoC | IV61_GL001969 | IV61_GL001174 | Acetyltransferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.442 |
KRO04630.1 | KRO04629.1 | IV61_GL001970 | IV61_GL001969 | Transcriptional regulator. | Acetyltransferase. | 0.563 |
KRO05592.1 | KRO04629.1 | IV61_GL001125 | IV61_GL001969 | Acetyltransferase. | Acetyltransferase. | 0.766 |
KRO05592.1 | rpoC | IV61_GL001125 | IV61_GL001174 | Acetyltransferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.446 |
KRO06209.1 | KRO04629.1 | IV61_GL000356 | IV61_GL001969 | Acetyltransferase. | Acetyltransferase. | 0.603 |
KRO06209.1 | rpoC | IV61_GL000356 | IV61_GL001174 | Acetyltransferase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.446 |
KRO07087.1 | KRO04629.1 | IV61_GL000735 | IV61_GL001969 | Flavoprotein. | Acetyltransferase. | 0.448 |
rpoC | KRO04629.1 | IV61_GL001174 | IV61_GL001969 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Acetyltransferase. | 0.442 |
rpoC | KRO05592.1 | IV61_GL001174 | IV61_GL001125 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Acetyltransferase. | 0.446 |
rpoC | KRO06209.1 | IV61_GL001174 | IV61_GL000356 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Acetyltransferase. | 0.446 |