STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06703.1N-acetylmuramoyl-L-alanine amidase. (283 aa)    
Predicted Functional Partners:
KRO05791.1
Periplasmic protease.
  
 
 0.983
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
  
 0.965
KRO06105.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.961
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.944
KRO06202.1
N-acetylmuramidase.
 
 
 0.927
KRO06409.1
Cell wall-associated hydrolase.
  
 
 0.926
KRO06139.1
Hypothetical protein.
  
 
  0.923
KRO07194.1
Muramidase (flagellum-specific).
 
 
 0.914
KRO05763.1
Phosphohydrolase.
    
  0.914
KRO05378.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.897
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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