STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06645.1LysM domain-containing protein. (210 aa)    
Predicted Functional Partners:
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
 
  0.882
KRO06703.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.849
cmk
Cytidylate kinase.
  
 
  0.843
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.839
KRO06647.1
Hypothetical protein.
 
     0.647
KRO05201.1
Quinolone resistance protein.
   
 
 0.609
KRO06643.1
30S ribosomal protein S1.
 
    0.607
KRO05049.1
Hypothetical protein.
   
 
 0.587
KRO05284.1
Hypothetical protein.
  
     0.579
KRO05277.1
Hypothetical protein.
  
     0.564
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.