STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO06506.1Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (551 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
 
 0.941
KRO04572.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.809
KRO05414.1
Glycosyl hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
 
0.806
KRO06505.1
Na+ xyloside symporter related transporter.
 
    0.804
uxaC
Glucuronate isomerase.
    
 0.782
uxaC-2
Glucuronate isomerase.
    
 0.782
KRO06290.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.637
KRO06303.1
Glycosyl hydrolase family 2, TIM barrel domain protein; Belongs to the glycosyl hydrolase 2 family.
    
  0.637
KRO05190.1
O-glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
 
 0.527
KRO04902.1
beta-D-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
    
  0.510
Your Current Organism:
Lactobacillus parabrevis
NCBI taxonomy Id: 357278
Other names: ATCC 53295, L. parabrevis, LMG 11984, LMG:11984, Lactobacillus parabrevis Vancanneyt et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.