STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30637.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
SFR30638.1
hydroxymethylglutaryl-CoA synthase.
       0.751
SFR50273.1
Flagellar protein FlaI.
       0.604
SFR57043.1
Hypothetical protein.
       0.604
SFR30636.1
Hypothetical protein.
       0.531
SFR40290.1
Flagellar protein FlaJ.
       0.459
SFR50261.1
Flagellar protein FlaJ.
       0.459
SFR30498.1
Flagellar protein FlaI.
       0.408
SFR40301.1
Flagellar protein FlaI.
       0.408
SFR57052.1
TatD-related deoxyribonuclease.
       0.402
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.