STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30641.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SFR39020.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 
 0.999
SFR45079.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.999
SFR39043.1
NADH-quinone oxidoreductase subunit I.
  
 
 0.998
SFR38449.1
Cytochrome b(N-terminal)/b6/petB.
  
 0.995
SFR38459.1
Cytochrome b(C-terminal)/b6/petD.
  
 0.994
SFR39010.1
NADH dehydrogenase subunit B; Belongs to the complex I 20 kDa subunit family.
   
 
 0.986
SFR39000.1
NADH dehydrogenase subunit A.
   
 
 0.976
SFR30802.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.973
SFR39093.1
NADH dehydrogenase subunit M.
   
 
 0.970
SFR39031.1
NADH dehydrogenase subunit H.
   
 
 0.965
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.