STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30743.1Acetyltransferase (GNAT) family protein. (189 aa)    
Predicted Functional Partners:
SFR30742.1
Nucleotide-binding universal stress protein, UspA family.
 
   
 0.931
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
 
     0.634
SFR30745.1
Uncharacterized membrane protein, DUF106 family.
 
     0.536
SFR33523.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
     0.516
SFR30741.1
Beta-glucosidase.
       0.509
SFR30766.1
Rad3-related DNA helicase.
  
 
   0.494
SFR45001.1
Uncharacterized protein.
  
    0.492
SFR44582.1
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.
  
     0.483
SFR46046.1
Cdc6-related protein, AAA superfamily ATPase.
  
     0.429
SFR33057.1
Reversibly glycosylated polypeptide.
  
     0.423
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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