STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30750.1Short-chain dehydrogenase. (277 aa)    
Predicted Functional Partners:
SFR39020.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 
 0.992
SFR37452.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.845
SFR32942.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 
 0.696
SFR57167.1
Arylsulfatase A.
   
 
 0.627
SFR30409.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.620
SFR51160.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.619
SFR57360.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  
  0.604
SFR30751.1
Hypothetical protein.
       0.531
SFR52382.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.495
SFR55717.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
 
 
 0.470
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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