STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR30753.1NitT/TauT family transport system permease protein. (268 aa)    
Predicted Functional Partners:
SFR30754.1
NitT/TauT family transport system ATP-binding protein.
 
 0.998
SFR30752.1
NitT/TauT family transport system substrate-binding protein; Manually curated.
 
 
 0.994
SFR45553.1
NitT/TauT family transport system ATP-binding protein.
 
 0.880
SFR30778.1
NitT/TauT family transport system ATP-binding protein.
 
 0.846
SFR30777.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.806
SFR45526.1
Sulfonate transport system substrate-binding protein.
 
 
 0.779
SFR30779.1
NMT1/THI5 like.
 
 
 0.581
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT.
 
 
 0.450
SFR30751.1
Hypothetical protein.
       0.437
SFR48832.1
FMNH2-dependent dimethyl sulfone monooxygenase.
 
 
 0.404
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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